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<?php
/**
* @file plugins/generic/dataverse/classes/DataverseFileDAO.inc.php
*
* Copyright (c) 2013-2019 Simon Fraser University
* Copyright (c) 2003-2019 John Willinsky
* Distributed under the GNU GPL v2. For full terms see the file docs/COPYING.
*
* @class DataverseFileDAO
* @ingroup plugins_generic_dataverse
*
* @brief Operations for retrieving and modifying DataverseFile objects.
*/
import('lib.pkp.classes.db.DAO');
class DataverseFileDAO extends DAO {
/** @var $_parentPluginName string Name of parent plugin */
var $_parentPluginName;
/**
* Constructor.
*/
function DataverseFileDAO($parentPluginName) {
$this->_parentPluginName = $parentPluginName;
parent::DAO();
}
/**
* Insert a new Dataverse file.
* @param $dvFile DataverseFile
* @return int
*/
function insertDataverseFile(&$dvFile) {
$this->update(
'INSERT INTO dataverse_files
(supp_id, submission_id, study_id, content_source_uri)
VALUES
(?, ?, ?, ?)',
array(
(int)$dvFile->getSuppFileId(),
(int)$dvFile->getSubmissionId(),
// Parent study and Dataverse Uri may not exist when record is inserted
$dvFile->getStudyId() ? (int)$dvFile->getStudyId() : 0,
$dvFile->getContentSourceUri() ? $dvFile->getContentSourceUri() : ''
)
);
$dvFile->setId($this->getInsertDataverseFileId());
return $dvFile->getId();
}
/**
* Update Dataverse file.
* @param $dvFile
* @return boolean
*/
function updateDataverseFile(&$dvFile) {
$returner = $this->update(
'UPDATE dataverse_files
SET
supp_id = ?,
study_id = ?,
submission_id = ?,
content_source_uri = ?
WHERE dvfile_id = ?',
array(
(int)$dvFile->getSuppFileId(),
(int)$dvFile->getStudyId(),
(int)$dvFile->getSubmissionId(),
$dvFile->getContentSourceUri(),
(int)$dvFile->getId()
)
);
return $returner;
}
/**
* Get ID of the last inserted Dataverse file.
* @return int
*/
function getInsertDataverseFileId() {
return $this->getInsertId('dataverse_files', 'dvfile_id');
}
/**
* Delete a Dataverse file.
* @param $dvFile DataverseFile
* @return boolean
*/
function deleteDataverseFile(&$dvFile) {
return $this->deleteDataverseFileById($dvFile->getId());
}
/**
* Delete a Dataverse file by ID.
* @param $dvFileId int
* @param $submissionId int optional
* @return boolean
*/
function deleteDataverseFileById($dvFileId, $submissionId = null) {
if (isset($submissionId)) {
$returner = $this->update('DELETE FROM dataverse_files WHERE dvfile_id = ? AND submission_id = ?', array((int)$dvFileId, (int)$submissionId));
return $returner;
}
return $this->update('DELETE FROM dataverse_files WHERE dvfile_id = ?', (int)$dvFileId);
}
/**
* Delete Dataverse files associated with a study.
* @param $studyId int
* @return boolean
*/
function deleteDataverseFilesByStudyId($studyId) {
$dvFiles =& $this->getDataverseFilesByStudyId($studyId);
foreach ($dvFiles as $dvFile) {
$this->deleteDataverseFile($dvFile);
}
}
/**
* Retrieve Dataverse file by supp id & optional submission.
* @param int $suppFileId
* @param int $submissionId
* @return DataverseFile
*/
function &getDataverseFileBySuppFileId($suppFileId, $submissionId = null) {
$params = array((int)$suppFileId);
if ($submissionId) $params[] = (int)$submissionId;
$result =& $this->retrieve(
'SELECT * FROM dataverse_files WHERE supp_id = ?' . ($submissionId?' AND submission_id = ?':''),
$params
);
$returner = null;
if ($result->RecordCount() != 0) {
$returner =& $this->_returnDataverseFileFromRow($result->GetRowAssoc(false));
}
$result->Close();
unset($result);
return $returner;
}
/**
* Retrieve Dataverse files for a submission.
* @param $submissionId int
* @return array
*/
function &getDataverseFilesBySubmissionId($submissionId) {
$dvFiles = array();
$result =& $this->retrieve(
'SELECT * FROM dataverse_files WHERE submission_id = ?',
(int) $submissionId
);
while (!$result->EOF) {
$dvFiles[] =& $this->_returnDataverseFileFromRow($result->GetRowAssoc(false));
$result->moveNext();
}
$result->Close();
unset($result);
return $dvFiles;
}
/**
* Retrieve Dataverse files for a study.
* @param $submissionId int
* @return array
*/
function &getDataverseFilesByStudyId($studyId) {
$dvFiles = array();
$result =& $this->retrieve(
'SELECT * FROM dataverse_files WHERE study_id = ?',
(int) $studyId
);
while (!$result->EOF) {
$dvFiles[] =& $this->_returnDataverseFileFromRow($result->GetRowAssoc(false));
$result->moveNext();
}
$result->Close();
unset($result);
return $dvFiles;
}
/**
* Internal function to return DataverseFile object from a row.
* @param $row array
* @return DataverseFile
*/
function &_returnDataverseFileFromRow(&$row) {
$dataversePlugin =& PluginRegistry::getPlugin('generic', $this->_parentPluginName);
$dataversePlugin->import('classes.DataverseFile');
$dvFile = new DataverseFile();
$dvFile->setId($row['dvfile_id']);
$dvFile->setSuppFileId($row['supp_id']);
$dvFile->setStudyId($row['study_id']);
$dvFile->setSubmissionId($row['submission_id']);
$dvFile->setContentSourceUri($row['content_source_uri']);
return $dvFile;
}
/**
* Update the Dataverse deposit status of a supplementary file.
* Files with deposit status = true will be deposited/updated in Dataverse.
* @param $suppFileId int
* @param $depositStatus boolean
*/
function setDepositStatus($suppFileId, $depositStatus) {
$idFields = array(
'supp_id', 'locale', 'setting_name'
);
$updateArray = array(
'supp_id' => (int)$suppFileId,
'locale' => '',
'setting_name' => 'dataverseDeposit',
'setting_type' => 'bool',
'setting_value' => (bool)$depositStatus
);
$this->replace('article_supp_file_settings', $updateArray, $idFields);
}
/**
* Set content source URI of Dataverse file.
* @param $suppFileId int
* @param $contentSourceUri string
*/
function setContentSourceUri($suppFileId, $contentSourceUri) {
$idFields = array(
'supp_id', 'locale', 'setting_name'
);
$updateArray = array(
'supp_id' => (int)$suppFileId,
'locale' => '',
'setting_name' => 'dataverseContentSourceUri',
'setting_type' => 'string',
'setting_value' => $contentSourceUri
);
$this->replace('article_supp_file_settings', $updateArray, $idFields);
}
}
?>